PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sme2.5_08014.1_g00003.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family NAC
Protein Properties Length: 390aa    MW: 43519.2 Da    PI: 6.9833
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sme2.5_08014.1_g00003.1genomeEGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM32.91.9e-107612974127
                      NAM  74 knratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgek.tdWvmheyr 127
                               n + ++gyW+  g+d  +++ +g+l+g +ktL + + +++k +k t+W mhey+
  Sme2.5_08014.1_g00003.1  76 CNSSDSDGYWEPYGTDSLIHK-DGKLIGYRKTLNYIEVKHEKDRKlTEWPMHEYT 129
                              4445679***********999.99************8866655544********7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100514.5736147IPR003441NAC domain
PfamPF023657.5E-577129IPR003441NAC domain
SuperFamilySSF1019414.84E-1577147IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    Send to blast
MSQFHVPSPA STDPFSSGKL DCYLGLVVLA AVGFGTRIQR IFVLVMHDVS CKADPFMAKK  60
KMHQGDLVIH ARSIQCNSSD SDGYWEPYGT DSLIHKDGKL IGYRKTLNYI EVKHEKDRKL  120
TEWPMHEYTR DRSSDDKQWV LCKLFKSGDK FLEAENKVAT KFAGPSIGVS SMDHTNQGPE  180
KADDLTDDKR PSNGRSCDLH PLPETDQGTM KPHSSSKLLD QAITPPPASD KVFMISHLPN  240
EKFQPAHDQG TRVSPHLPQN DQRTVSRTST GPHKANNVVV TDKVPSNCLN FDLHPVAAQK  300
VPPELQYDQQ TMVPLSGIHN MNNDEIIVKP PMLNHHHDAL DLPSSDQVPK LPSVDGSPHG  360
SHENEAITWW MAVLYCKKAA TIRWTVSVLD
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016572865.11e-117PREDICTED: uncharacterized protein LOC107870754 isoform X1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1503569
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56010.12e-11NAC domain containing protein 1